Font size
  • A-
  • A
  • A+
Site color
  • R
  • A
  • A
  • A
eCampus
  • MAIN
  • eCAMPUS
    CLASS
  • FORUM
  • English ‎(en)‎ Español - Internacional ‎(es)‎
  • Acceder
Skip to main content

VariantSeq: tutorial for usage with case study.

  1. Home
  2. Courses
  3. VariantSeq Tutorial
  4. Pipeline mode: SNP/Indels results
  5. 01_FASTQC
  • CONTENTS
  • 1. PRELIMINARY INFORMATION
    • 1.1 - Tutorial objective
    • 1.2 - Tutorial material and case study
    • 1.3 - Experiment design and support
    • 1.4 - Installing and activating VariantSeq and the Server-Side
  • 2. STEP-BY-STEP MODE TUTORIAL
    • 2.1 - Preparing your experiment
    • 2.2 - Quality analysis and preprocessing
    • 2.3 - Mapping
    • 2.4 - Postprocessing
    • 2.5 - Variant calling
    • 2.6 - Variant filtering
    • 2.7 - Annotation
  • 3. PIPELINE MODE TUTORIAL
  • 4. BIBLIOGRAPHY
  • CITE US

01_FASTQC

 
 CAN2_R1_allCAN2_R1_all
 CAN2_R2_allCAN2_R2_all
 CAN3_R1_allCAN3_R1_all
 CAN3_R2_allCAN3_R2_all
 CAN4_R1_allCAN4_R1_all
 CAN4_R2_allCAN4_R2_all
 CAN5_R1_allCAN5_R1_all
 CAN5_R2_allCAN5_R2_all
 CAN12_R1_allCAN12_R1_all
 CAN12_R2_allCAN12_R2_all
Next activity 02_PRINSEQ ►
  • Home
  • Calendar
  • Course sections
    • CONTENTS
    • 1. PRELIMINARY INFORMATION
    • 1.1 - Tutorial objective
    • 1.2 - Tutorial material and case study
    • 1.3 - Experiment design and support
    • 1.4 - Installing and activating Variantseq and the Server-Side
    • 2. STEP-BY-STEP MODE TUTORIAL
    • 2.1 - Preparing your experiment
    • 2.2 - Quality analysis and preprocessing
    • 2.3 - Mapping
    • 2.4 - Postprocessing
    • 2.5 - Variant calling
    • 2.6 - Variant filtering
    • 2.7 - Annotation
    • 3. PIPELINE MODE TUTORIAL
    • 4. BIBLIOGRAPHY
    • Pipeline mode: SNP/Indels results
    • CITE US
    • 4. BIBLIOGRAPHY
Accessibility settings
About us
Team
Publications
R&D
Patents & trademarks
Announcements
Careers
Journal Sequencing Partners

Biotechvana


Valencia Lab
Parc Cientific Universitat de Valencia
Carrer del Catedràtic Agustín Escardino, 9. 46980 Paterna (Valencia) Spain
Madrid Lab
Parque Científico de Madrid
Campus de Cantoblanco
Calle Faraday 7, 28049 Madrid Spain
Contact us
Phone: +34 960 06 74 93
Email: biotechvana@biotechvana.com

Esta plataforma forma parte de: IVACE PROJECT IMDIGB/2020/56


Projectes de Digitalizació de PIME (DIGITALIZA-CV TELETREBALL)2020
IVACE PROJECT IMDIGB/2020/56

Biotechvana © 2021
eCampus Privacy policy    eCampus Terms of use