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VariantSeq: tutorial for usage with case study.
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Nuestros cursos
VariantSeq Tutorial
Pipeline mode: SNP/Indels results
CONTENTS
1. PRELIMINARY INFORMATION
1.1 - Tutorial objective
1.2 - Tutorial material and case study
1.3 - Experiment design and support
1.4 - Installing and activating VariantSeq and the Server-Side
2. STEP-BY-STEP MODE TUTORIAL
2.1 - Preparing your experiment
2.2 - Quality analysis and preprocessing
2.3 - Mapping
2.4 - Postprocessing
2.5 - Variant calling
2.6 - Variant filtering
2.7 - Annotation
3. PIPELINE MODE TUTORIAL
4. BIBLIOGRAPHY
CITE US
Pipeline mode: SNP/Indels results
01_FASTQC
Carpeta
02_PRINSEQ
Carpeta
03_FASTQC
Carpeta
04_Bwa
Carpeta
05_picardAddReplaceReadGroups
Carpeta
06_picardMarkDuplicates
Carpeta
07_BQSR
Carpeta
08_mutect2
Carpeta
◄
4. BIBLIOGRAPHY
CITE US
►
Página Principal
Calendario
Secciones del curso
CONTENTS
1. PRELIMINARY INFORMATION
1.1 - Tutorial objective
1.2 - Tutorial material and case study
1.3 - Experiment design and support
1.4 - Installing and activating Variantseq and the Server-Side
2. STEP-BY-STEP MODE TUTORIAL
2.1 - Preparing your experiment
2.2 - Quality analysis and preprocessing
2.3 - Mapping
2.4 - Postprocessing
2.5 - Variant calling
2.6 - Variant filtering
2.7 - Annotation
3. PIPELINE MODE TUTORIAL
4. BIBLIOGRAPHY
Pipeline mode: SNP/Indels results
CITE US
4. BIBLIOGRAPHY
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Valencia Lab
Parc Cientific Universitat de Valencia
Carrer del Catedràtic Agustín Escardino, 9. 46980 Paterna (Valencia) Spain
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Campus de Cantoblanco
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Contact us
Phone: +34 960 06 74 93
Email:
biotechvana@biotechvana.com
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