Basic Statistics
Measure | Value |
---|---|
Filename | ZFG-17-12_28_26358_S14_R1_001.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 17762078 |
Sequences flagged as poor quality | 0 |
Sequence length | 45-51 |
%GC | 47 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CCTACTA | 2775 | 0.0 | 19.315203 | 43 |
TCCTACT | 3420 | 0.0 | 15.719563 | 42 |
ATTCCTA | 3575 | 0.0 | 15.404991 | 40 |
TTCCTAC | 3650 | 0.0 | 14.659911 | 41 |
GCCAATT | 5185 | 0.0 | 13.162376 | 1 |
GCGGTAT | 3870 | 0.0 | 11.6735115 | 11 |
ATATTCC | 4675 | 0.0 | 11.634991 | 38 |
TTAGCGG | 4060 | 0.0 | 11.516252 | 8 |
CCCGAAT | 915 | 0.0 | 11.323409 | 1 |
AATCCGC | 1075 | 0.0 | 11.290679 | 32 |
GAGTTAA | 5375 | 0.0 | 10.99712 | 17 |
CGCTACG | 1030 | 0.0 | 10.910859 | 36 |
GCTTCGC | 3315 | 0.0 | 10.804893 | 45 |
TTTAGCG | 4905 | 0.0 | 10.724242 | 7 |
CCAATTT | 5805 | 0.0 | 10.709383 | 2 |
TATTCCT | 5310 | 0.0 | 10.666932 | 39 |
TGAGTTA | 5455 | 0.0 | 10.630018 | 16 |
GTTAAAC | 5670 | 0.0 | 10.425019 | 19 |
GTCCGAT | 3305 | 0.0 | 10.154424 | 1 |
TACTACT | 6200 | 0.0 | 10.063392 | 45 |