Basic Statistics
Measure | Value |
---|---|
Filename | ZFG-17-12_24_26354_S10_R1_001.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 28070496 |
Sequences flagged as poor quality | 0 |
Sequence length | 45-51 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CCTACTA | 4860 | 0.0 | 18.81229 | 43 |
TCCTACT | 5720 | 0.0 | 16.201029 | 42 |
ATTCCTA | 5855 | 0.0 | 16.04839 | 40 |
TTCCTAC | 6030 | 0.0 | 15.286996 | 41 |
GCCAATT | 8335 | 0.0 | 13.890155 | 1 |
ATATTCC | 7305 | 0.0 | 12.984533 | 38 |
TATTCCT | 8055 | 0.0 | 11.719758 | 39 |
GAGTTAA | 8830 | 0.0 | 11.097755 | 17 |
GTTAAAC | 9020 | 0.0 | 10.938936 | 19 |
CCAATTT | 9725 | 0.0 | 10.909404 | 2 |
TGAGTTA | 9135 | 0.0 | 10.702734 | 16 |
GCGGTAT | 6850 | 0.0 | 10.532727 | 11 |
TTTAGCG | 8400 | 0.0 | 10.463507 | 7 |
TTAGCGG | 7705 | 0.0 | 10.444263 | 8 |
CCCGAAT | 1225 | 0.0 | 10.296782 | 1 |
GTCGATT | 2555 | 0.0 | 9.785469 | 1 |
GTCCGAT | 5220 | 0.0 | 9.665562 | 1 |
CATATTC | 10215 | 0.0 | 9.659626 | 37 |
GGGGATT | 7490 | 0.0 | 9.563016 | 1 |
TACTACT | 10685 | 0.0 | 9.557731 | 45 |