Basic Statistics
Measure | Value |
---|---|
Filename | ZFG-17-12_16_26346_S2_R1_001.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 19463442 |
Sequences flagged as poor quality | 0 |
Sequence length | 45-51 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CCTACTA | 2220 | 0.0 | 15.216209 | 43 |
GTGCATT | 6945 | 0.0 | 11.02607 | 1 |
GCGGTAT | 4105 | 0.0 | 10.950699 | 11 |
GCCAATT | 4655 | 0.0 | 10.837831 | 1 |
TCCTACT | 3135 | 0.0 | 10.834956 | 42 |
TTAGCGG | 4765 | 0.0 | 10.425738 | 8 |
TTTAGCG | 5790 | 0.0 | 10.172298 | 7 |
CCCGAAT | 960 | 0.0 | 10.088144 | 1 |
TTCCTAC | 3425 | 0.0 | 10.043634 | 41 |
GTCGGTT | 2695 | 0.0 | 9.9449415 | 1 |
GTCCGAT | 3725 | 0.0 | 9.855425 | 1 |
GGGGATT | 5225 | 0.0 | 9.827942 | 1 |
CGCCGAA | 2370 | 0.0 | 9.673347 | 11 |
CCCGTAT | 1085 | 0.0 | 9.341074 | 1 |
CGGTATC | 5525 | 0.0 | 9.315781 | 12 |
GTCCATT | 7420 | 0.0 | 9.19714 | 1 |
GTCGATT | 2120 | 0.0 | 9.136433 | 1 |
GTCGGAT | 2395 | 0.0 | 9.121794 | 1 |
AAGCACG | 3450 | 0.0 | 9.039842 | 45 |
GTCGCTT | 2495 | 0.0 | 9.027001 | 1 |