Basic Statistics
Measure | Value |
---|---|
Filename | ZFG-17-12_09_26339_S13_R1_001.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 16514775 |
Sequences flagged as poor quality | 0 |
Sequence length | 45-51 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGTTCGA | 970 | 0.0 | 10.709868 | 45 |
GTCCGAT | 3045 | 0.0 | 9.968417 | 1 |
GTGCATT | 5260 | 0.0 | 9.917038 | 1 |
TTAGCGG | 3300 | 0.0 | 9.877857 | 8 |
GCGGTAT | 3130 | 0.0 | 9.840305 | 11 |
GTCCGTT | 2905 | 0.0 | 9.597437 | 1 |
GTCCATT | 6580 | 0.0 | 9.567795 | 1 |
GTCCTAT | 1245 | 0.0 | 9.391041 | 1 |
CCGCAAG | 1085 | 0.0 | 9.323768 | 35 |
GTCGAAT | 1400 | 0.0 | 9.314932 | 1 |
TTTAGCG | 3975 | 0.0 | 9.275032 | 7 |
GTCCGCT | 2115 | 0.0 | 8.929941 | 1 |
CGCTACG | 940 | 0.0 | 8.609607 | 36 |
AATCCGC | 995 | 0.0 | 8.585572 | 32 |
CTCGTAT | 2760 | 0.0 | 8.553816 | 1 |
GTCGGAT | 1980 | 0.0 | 8.516787 | 1 |
CGCAAGG | 1120 | 0.0 | 8.430241 | 36 |
GTCGATT | 1575 | 0.0 | 8.422696 | 1 |
CCGATCG | 645 | 1.8189894E-11 | 8.365903 | 3 |
CTCCTAT | 1990 | 0.0 | 8.361002 | 1 |