Basic Statistics
Measure | Value |
---|---|
Filename | ZFG-17-12_06_26336_S10_R1_001.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 14847317 |
Sequences flagged as poor quality | 0 |
Sequence length | 45-51 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
ATTCCTA | 4585 | 0.0 | 20.498775 | 40 |
TCCTACT | 4585 | 0.0 | 20.267569 | 42 |
TTCCTAC | 4705 | 0.0 | 19.646793 | 41 |
CCTACTA | 4810 | 0.0 | 19.250341 | 43 |
ATATTCC | 5540 | 0.0 | 17.16553 | 38 |
TATTCCT | 5900 | 0.0 | 15.965994 | 39 |
GTTAAAC | 6405 | 0.0 | 14.989076 | 19 |
GAGTTAA | 6355 | 0.0 | 14.93026 | 17 |
AAGCACG | 3155 | 0.0 | 14.620921 | 45 |
TGAGTTA | 6550 | 0.0 | 14.520099 | 16 |
GCCAATT | 7055 | 0.0 | 14.342328 | 1 |
CATATTC | 7005 | 0.0 | 13.800157 | 37 |
CCCGGAT | 2535 | 0.0 | 13.038977 | 1 |
AACATAT | 7390 | 0.0 | 12.929096 | 35 |
ATGAGTT | 7600 | 0.0 | 12.5434475 | 15 |
GTGCATT | 5255 | 0.0 | 12.366 | 1 |
CCAATTT | 8390 | 0.0 | 11.845801 | 2 |
CAATTTG | 8555 | 0.0 | 11.564258 | 3 |
AATTTGA | 9545 | 0.0 | 11.494562 | 4 |
ATTTGGC | 8445 | 0.0 | 11.420592 | 5 |