Basic Statistics
Measure | Value |
---|---|
Filename | ZFG-17-12_03_26333_S7_R1_001.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 16865336 |
Sequences flagged as poor quality | 0 |
Sequence length | 45-51 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CCTACTA | 4465 | 0.0 | 18.567596 | 43 |
TCCTACT | 4765 | 0.0 | 17.517954 | 42 |
TTCCTAC | 4865 | 0.0 | 17.197231 | 41 |
ATTCCTA | 4905 | 0.0 | 16.778044 | 40 |
CGTTCGA | 1175 | 0.0 | 16.67975 | 45 |
CGCAAGG | 1275 | 0.0 | 15.693035 | 36 |
ATATTCC | 5615 | 0.0 | 15.134764 | 38 |
ACCCGGG | 1530 | 0.0 | 13.519348 | 27 |
CCGCAAG | 1475 | 0.0 | 13.412749 | 35 |
TATTCCT | 6390 | 0.0 | 13.334669 | 39 |
GCCAATT | 7120 | 0.0 | 13.2641325 | 1 |
GAGTTAA | 6240 | 0.0 | 13.25999 | 17 |
GTTAAAC | 6590 | 0.0 | 13.101565 | 19 |
GCCGCAA | 1510 | 0.0 | 12.952972 | 34 |
TGAGTTA | 6350 | 0.0 | 12.88877 | 16 |
CATATTC | 6920 | 0.0 | 12.475337 | 37 |
AAGCACG | 3110 | 0.0 | 12.010556 | 45 |
GATACGA | 2255 | 0.0 | 11.764206 | 36 |
GCTCCGA | 7380 | 0.0 | 11.454955 | 24 |
ATGAGTT | 7410 | 0.0 | 11.287814 | 15 |