Basic Statistics
Measure | Value |
---|---|
Filename | ZFG-17-12_28_26358_S14_R1_001.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 18276109 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 47 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CCTACTA | 3000 | 0.0 | 16.94538 | 43 |
TTCCTAC | 3530 | 0.0 | 14.847347 | 41 |
TCCTACT | 3460 | 0.0 | 14.822993 | 42 |
ATTCCTA | 3595 | 0.0 | 13.890282 | 40 |
GCCAATT | 4985 | 0.0 | 13.704442 | 1 |
CGCTACG | 925 | 0.0 | 12.1588125 | 36 |
AAGCACG | 2460 | 0.0 | 11.718814 | 45 |
ATATTCC | 4670 | 0.0 | 11.02982 | 38 |
GCTTCGC | 3360 | 0.0 | 10.858868 | 45 |
TTAGCGG | 3805 | 0.0 | 10.82041 | 8 |
GCGGTAT | 3605 | 0.0 | 10.545378 | 11 |
GTCGCTT | 2255 | 0.0 | 10.198528 | 1 |
GAGTTAA | 5745 | 0.0 | 10.179545 | 17 |
TGCTTCG | 3725 | 0.0 | 10.083753 | 44 |
TTTAGCG | 4645 | 0.0 | 10.074781 | 7 |
CCAATTT | 6120 | 0.0 | 10.01682 | 2 |
GTTAAAC | 5905 | 0.0 | 9.942223 | 19 |
GTCCGTT | 3535 | 0.0 | 9.822346 | 1 |
TGAGTTA | 5820 | 0.0 | 9.77786 | 16 |
TCCGATT | 6580 | 0.0 | 9.743157 | 26 |