Basic Statistics
Measure | Value |
---|---|
Filename | ZFG-17-12_24_26354_S10_R1_001.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 28812309 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CCTACTA | 4905 | 0.0 | 18.572355 | 43 |
TCCTACT | 5695 | 0.0 | 16.036196 | 42 |
ATTCCTA | 6010 | 0.0 | 14.89594 | 40 |
TTCCTAC | 6140 | 0.0 | 14.800488 | 41 |
GCCAATT | 8405 | 0.0 | 13.037088 | 1 |
ATATTCC | 7445 | 0.0 | 12.296583 | 38 |
TATTCCT | 8335 | 0.0 | 11.199386 | 39 |
GAGTTAA | 9320 | 0.0 | 10.691393 | 17 |
TGAGTTA | 9235 | 0.0 | 10.594929 | 16 |
GCGGTAT | 6955 | 0.0 | 10.479131 | 11 |
CCAATTT | 9795 | 0.0 | 10.355024 | 2 |
GTTAAAC | 9600 | 0.0 | 10.262533 | 19 |
AAGCACG | 4835 | 0.0 | 10.248626 | 45 |
TTTAGCG | 8660 | 0.0 | 10.209951 | 7 |
TTAGCGG | 7940 | 0.0 | 10.11542 | 8 |
GGGGATT | 8410 | 0.0 | 9.812219 | 1 |
GTCGATT | 2805 | 0.0 | 9.565247 | 1 |
CATATTC | 10115 | 0.0 | 9.562305 | 37 |
GTCGGTT | 3770 | 0.0 | 9.44926 | 1 |
TCGCTAG | 1235 | 0.0 | 9.289071 | 42 |