Basic Statistics
Measure | Value |
---|---|
Filename | ZFG-17-12_09_26339_S13_R1_001.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 16993867 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CCCGAAT | 745 | 0.0 | 13.592724 | 1 |
CGTTCGA | 950 | 0.0 | 9.705811 | 45 |
GTGCATT | 5470 | 0.0 | 9.62673 | 1 |
GGGGATT | 4290 | 0.0 | 9.389576 | 1 |
TTAGCGG | 3450 | 0.0 | 9.261415 | 8 |
AAGCACG | 2555 | 0.0 | 8.978025 | 45 |
TTTAGCG | 4035 | 0.0 | 8.922353 | 7 |
CTCCAAT | 5805 | 0.0 | 8.761057 | 1 |
GTCCGAT | 3070 | 0.0 | 8.722859 | 1 |
GTCCATT | 6395 | 0.0 | 8.691739 | 1 |
CTCGTAT | 2745 | 0.0 | 8.6079 | 1 |
GTCGGTA | 890 | 0.0 | 8.596847 | 1 |
GCGGTAT | 3140 | 0.0 | 8.528425 | 11 |
CGCAAGG | 1245 | 0.0 | 8.491225 | 36 |
CTCGGAT | 1415 | 0.0 | 8.428877 | 1 |
GTCGAAT | 1470 | 0.0 | 8.419681 | 1 |
GTCCTAT | 1230 | 0.0 | 8.415947 | 1 |
TCGAGTT | 1795 | 0.0 | 8.39959 | 2 |
CTCCTAT | 2010 | 0.0 | 8.3968315 | 1 |
GTCCGTT | 3025 | 0.0 | 8.331878 | 1 |