Basic Statistics
Measure | Value |
---|---|
Filename | ZFG-17-12_03_26333_S7_R1_001.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 17311182 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CCTACTA | 4595 | 0.0 | 18.695509 | 43 |
TCCTACT | 4750 | 0.0 | 18.27493 | 42 |
TTCCTAC | 4895 | 0.0 | 17.54987 | 41 |
ATTCCTA | 5130 | 0.0 | 16.788893 | 40 |
ATATTCC | 5730 | 0.0 | 15.11065 | 38 |
CGTTCGA | 1165 | 0.0 | 14.863439 | 45 |
GAGTTAA | 6230 | 0.0 | 13.908082 | 17 |
GCCGCAA | 1355 | 0.0 | 13.613886 | 34 |
CCGCAAG | 1310 | 0.0 | 13.564909 | 35 |
GTTAAAC | 6615 | 0.0 | 13.234822 | 19 |
TATTCCT | 6620 | 0.0 | 13.044885 | 39 |
TGAGTTA | 6580 | 0.0 | 12.826555 | 16 |
GATACGA | 2365 | 0.0 | 12.743747 | 36 |
CGCAAGG | 1335 | 0.0 | 12.63582 | 36 |
GCCAATT | 7430 | 0.0 | 12.628635 | 1 |
ATACGAT | 2485 | 0.0 | 12.218158 | 37 |
CATATTC | 7305 | 0.0 | 12.068803 | 37 |
AAGCACG | 3495 | 0.0 | 11.131492 | 45 |
AACATAT | 8000 | 0.0 | 10.965684 | 35 |
CAATTTG | 8455 | 0.0 | 10.8582735 | 3 |